CDS

Accession Number TCMCG057C53313
gbkey CDS
Protein Id XP_018459139.1
Location join(751..1084,1331..1549,1636..3139,3299..3302)
Gene LOC108830028
GeneID 108830028
Organism Raphanus sativus

Protein

Length 686aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018603637.1
Definition PREDICTED: cryptochrome-1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category LT
Description Blue/Ultraviolet sensing protein C terminal
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K12118        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04712        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0000166        [VIEW IN EMBL-EBI]
GO:0000302        [VIEW IN EMBL-EBI]
GO:0000304        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0001558        [VIEW IN EMBL-EBI]
GO:0002682        [VIEW IN EMBL-EBI]
GO:0002684        [VIEW IN EMBL-EBI]
GO:0002831        [VIEW IN EMBL-EBI]
GO:0002833        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004672        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005524        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006732        [VIEW IN EMBL-EBI]
GO:0006753        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006873        [VIEW IN EMBL-EBI]
GO:0006874        [VIEW IN EMBL-EBI]
GO:0006875        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006979        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007584        [VIEW IN EMBL-EBI]
GO:0007623        [VIEW IN EMBL-EBI]
GO:0008144        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008219        [VIEW IN EMBL-EBI]
GO:0009117        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009414        [VIEW IN EMBL-EBI]
GO:0009415        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009581        [VIEW IN EMBL-EBI]
GO:0009582        [VIEW IN EMBL-EBI]
GO:0009583        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009637        [VIEW IN EMBL-EBI]
GO:0009638        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009640        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009644        [VIEW IN EMBL-EBI]
GO:0009645        [VIEW IN EMBL-EBI]
GO:0009646        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009785        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009812        [VIEW IN EMBL-EBI]
GO:0009881        [VIEW IN EMBL-EBI]
GO:0009882        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009914        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0009991        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010073        [VIEW IN EMBL-EBI]
GO:0010075        [VIEW IN EMBL-EBI]
GO:0010112        [VIEW IN EMBL-EBI]
GO:0010114        [VIEW IN EMBL-EBI]
GO:0010117        [VIEW IN EMBL-EBI]
GO:0010118        [VIEW IN EMBL-EBI]
GO:0010218        [VIEW IN EMBL-EBI]
GO:0010244        [VIEW IN EMBL-EBI]
GO:0010310        [VIEW IN EMBL-EBI]
GO:0010343        [VIEW IN EMBL-EBI]
GO:0010359        [VIEW IN EMBL-EBI]
GO:0010617        [VIEW IN EMBL-EBI]
GO:0010817        [VIEW IN EMBL-EBI]
GO:0012501        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0017076        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0019725        [VIEW IN EMBL-EBI]
GO:0022603        [VIEW IN EMBL-EBI]
GO:0022604        [VIEW IN EMBL-EBI]
GO:0022898        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030003        [VIEW IN EMBL-EBI]
GO:0030522        [VIEW IN EMBL-EBI]
GO:0030554        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031349        [VIEW IN EMBL-EBI]
GO:0031667        [VIEW IN EMBL-EBI]
GO:0031668        [VIEW IN EMBL-EBI]
GO:0031669        [VIEW IN EMBL-EBI]
GO:0031670        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032101        [VIEW IN EMBL-EBI]
GO:0032103        [VIEW IN EMBL-EBI]
GO:0032409        [VIEW IN EMBL-EBI]
GO:0032411        [VIEW IN EMBL-EBI]
GO:0032412        [VIEW IN EMBL-EBI]
GO:0032414        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0032555        [VIEW IN EMBL-EBI]
GO:0032559        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0034599        [VIEW IN EMBL-EBI]
GO:0034614        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034762        [VIEW IN EMBL-EBI]
GO:0034764        [VIEW IN EMBL-EBI]
GO:0034765        [VIEW IN EMBL-EBI]
GO:0034767        [VIEW IN EMBL-EBI]
GO:0035639        [VIEW IN EMBL-EBI]
GO:0035690        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0036473        [VIEW IN EMBL-EBI]
GO:0038023        [VIEW IN EMBL-EBI]
GO:0040008        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042440        [VIEW IN EMBL-EBI]
GO:0042493        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0042726        [VIEW IN EMBL-EBI]
GO:0042752        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043269        [VIEW IN EMBL-EBI]
GO:0043270        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043900        [VIEW IN EMBL-EBI]
GO:0043902        [VIEW IN EMBL-EBI]
GO:0044070        [VIEW IN EMBL-EBI]
GO:0044093        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045088        [VIEW IN EMBL-EBI]
GO:0045089        [VIEW IN EMBL-EBI]
GO:0046283        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046777        [VIEW IN EMBL-EBI]
GO:0048037        [VIEW IN EMBL-EBI]
GO:0048507        [VIEW IN EMBL-EBI]
GO:0048509        [VIEW IN EMBL-EBI]
GO:0048511        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048581        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0048638        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048831        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0050660        [VIEW IN EMBL-EBI]
GO:0050662        [VIEW IN EMBL-EBI]
GO:0050776        [VIEW IN EMBL-EBI]
GO:0050778        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050801        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051049        [VIEW IN EMBL-EBI]
GO:0051050        [VIEW IN EMBL-EBI]
GO:0051093        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051186        [VIEW IN EMBL-EBI]
GO:0051193        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051241        [VIEW IN EMBL-EBI]
GO:0051480        [VIEW IN EMBL-EBI]
GO:0051510        [VIEW IN EMBL-EBI]
GO:0051606        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055065        [VIEW IN EMBL-EBI]
GO:0055074        [VIEW IN EMBL-EBI]
GO:0055080        [VIEW IN EMBL-EBI]
GO:0055082        [VIEW IN EMBL-EBI]
GO:0055086        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0060089        [VIEW IN EMBL-EBI]
GO:0060918        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071000        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071452        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071483        [VIEW IN EMBL-EBI]
GO:0071496        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071949        [VIEW IN EMBL-EBI]
GO:0072387        [VIEW IN EMBL-EBI]
GO:0072503        [VIEW IN EMBL-EBI]
GO:0072507        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:0097468        [VIEW IN EMBL-EBI]
GO:0098771        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1900424        [VIEW IN EMBL-EBI]
GO:1900426        [VIEW IN EMBL-EBI]
GO:1900618        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901332        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901371        [VIEW IN EMBL-EBI]
GO:1901529        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901672        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:1902347        [VIEW IN EMBL-EBI]
GO:1902446        [VIEW IN EMBL-EBI]
GO:1902448        [VIEW IN EMBL-EBI]
GO:1903793        [VIEW IN EMBL-EBI]
GO:1903959        [VIEW IN EMBL-EBI]
GO:1903961        [VIEW IN EMBL-EBI]
GO:1905421        [VIEW IN EMBL-EBI]
GO:2000023        [VIEW IN EMBL-EBI]
GO:2000024        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000030        [VIEW IN EMBL-EBI]
GO:2000069        [VIEW IN EMBL-EBI]
GO:2000280        [VIEW IN EMBL-EBI]
GO:2000377        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTAATACATGTTCAGGAGGTGGTGGTGGTGGGTGTAGTATTGTATGGTTTAGAAGAGATCTAAGAGTTGAAGACAATCCAGCTTTAGCTGCAGCTGTAAGAGCTGGACCTGTAATTGCTGTGTTTGTATGGGCACCAGAGGAAGAAGGACACTATCAGCCTGGTAGGGTTTCAAGGTGGTGGCTCAAGAACAGTTTGGCTCAGCTTGATTCTGCGCTTAGAAGCCTTGGTACTTGTCTCATTACCAAGAGATCTACTGATAGTGTTGCTTCTCTTCTTGAAGTTGTTAAATCCACTGGTGCTTCTCAGATCTTCTTCAACCATTTGTATGATCCCTTATCCTTGGTCCGTGATCATCGTGCCAAGGACGCTCTGACAGCGGAAGGGATAGCGGTTAAATCATTCAACGCAGATTTGCTTTACGAGCCATGGGAAGTGACTGATGAATTAGGCCGTCCTTTCTCAATGTTTGCTGCCTTTTGGGAAAGATGCCTTAGCATGCCTTATGACCCTGAGTCTCCTCTTCTACCACCCAAGAAGATCATTTCTGGTGATGTGTCCAAGTGTGTTGCGGATACATTGATCTTCGAAGATGAATCAGAGAAAGGAAGCAATGCACTTCTAGCTCGTGCCTGGTCTCCCGGTTGGAGTAATGCTGATAAGGCTCTCACAACCTTCATAAACGGACCATTGATTGAATACTCCAAGAACCGGAGAAAAGCTGATAGTGCCACAACCTCGTTCCTTTCTCCACACTTGCATTTTGGGGAAGTGAGTGTGAGAAAAGTGTTCCATCTTCTTCGGATCAAACAGGTTGCGTGGGCAAACGAAGGAAACCAAGCCGGGGAAGAGAGCGTGAACCTTTTCCTCAAATCTATTGGTCTCAGGGAATACTCTAGGTACATAAGCTTCAACCATCCCTACTCTCATGAAAGACCACTTCTCGGCCATCTTAAGTTCTTCCCTTGGGCTGTTGATGAGAACTACTTCAAGGCGTGGAGGCAAGGCCGGACCGGGTATCCCTTGGTCGACGCCGGGATGAGAGAGTTATGGGCTACTGGTTGGTTGCACGATCGCATAAGAGTAGTTGTTTCAAGCTTCTTTGTGAAAGTGCTTCAACTGCCGTGGAGATGGGGGATGAAGTACTTCTGGGACACACTTCTTGATGCAGATTTAGAGAGTGATGCTCTTGGCTGGCAATACATTACCGGTACTCTCCCGGATAGCCGGGAGTTTGACCGCATAGATAACCCTCAGTTCGAAGGATACAAGTTTGATCCAAACGGTGAATACGTAAGGAGATGGCTCCCAGAGCTTTCAAGACTCCCCACAGAGTGGATACATCATCCATGGAACGCCCCTGAGTCCGTGCTTCAAGCTGCTGGTATTGAGCTCGGATCGAACTATCCTCGACCAATTGTTGGATTAGATGAAGCGAAAGCACGGCTTCACGAAGCGCTTTCGCAGATGTGGCAACTAGAAGCTGCCGCAAGAGCTGCGATAGAGAACGGATCGGAGGAAGGACTTGGAGACTCTACTGAGTTTGAGGAAGCTCCTATCGAGTTCCCTAGAGACATCACAATGGAAGAGACTGAACCAACCAGACTCAACCCAGTCAGGAGATATGAGGATCAAATGGTTCCAAGCATTACTACTTCTTTGATCAGACCTGAAGAAGATGAAGAGTCGTCTCTCAATGTAAGAAATTCAGTTGGAGATAGCAGAGCAGAGGTTCCGAGAAACATGGTCAACACCAACCAAGCTCAGCAGCAGCAGCAGCAGCAGCAGGCAAGAGCAGATCCGGTTTCGAACCAAGTCACTGCTATGATTCCAGAATTCAATATTAGAATTGTTGCAGAAAGCACTGAAGACTCGACAGCAGAATCTTCCAGCAGCAGAAGAAGAGAGAGGGACGGAGGCATAGTCCCCGAGTGGTCAGGGTACTCTGAACAATTTGCTAGTGAAGAGAATGGGATTGGAGGAGCAAGTACAACATCTAGCTACTTGCAGAACCACCATGAAATAGTTAACTGGAGACGGCTTTCACAAACCGGGTAA
Protein:  
MSNTCSGGGGGGCSIVWFRRDLRVEDNPALAAAVRAGPVIAVFVWAPEEEGHYQPGRVSRWWLKNSLAQLDSALRSLGTCLITKRSTDSVASLLEVVKSTGASQIFFNHLYDPLSLVRDHRAKDALTAEGIAVKSFNADLLYEPWEVTDELGRPFSMFAAFWERCLSMPYDPESPLLPPKKIISGDVSKCVADTLIFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLLRIKQVAWANEGNQAGEESVNLFLKSIGLREYSRYISFNHPYSHERPLLGHLKFFPWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRIDNPQFEGYKFDPNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPRPIVGLDEAKARLHEALSQMWQLEAAARAAIENGSEEGLGDSTEFEEAPIEFPRDITMEETEPTRLNPVRRYEDQMVPSITTSLIRPEEDEESSLNVRNSVGDSRAEVPRNMVNTNQAQQQQQQQQARADPVSNQVTAMIPEFNIRIVAESTEDSTAESSSSRRRERDGGIVPEWSGYSEQFASEENGIGGASTTSSYLQNHHEIVNWRRLSQTG